EurOPDX Data Portal - Release Notes
Release 2.1
[ 29th Jul 2021]
-
Static cBioPortal upgrade to v3.6.7 - available at cbioportal.europdx.eu
- Fixes in DataPortal on PDX Model Details page
- Corrected displaying of user login
- Details for some PDX models did not display - correcred
- Explicit information about ‘Acceptable Use Policy and Conditions of Use’ before downloading data
- Modal dialog at search page
- Text information at PDX Model Details page
- EDIReX Galaxy Pipelines with DataPortal Sandbox available at pipeline-prod.edirex.ics.muni.cz
- Data provider can process acquired raw sequencing data via a bioinformatics pipeline implemented on Galaxy platform and validate the result dataset in a sandbox DataPortal and cBioPortal
- For more information see EDIReX Galaxy Pipelines documentation
Release 2.0.2
[ 30th Mar 2021]
- Merge of PDXFidner (commit from Jan 21st, 2021)
- Search according to PdxModelID moved to ‘Filter By’ section
- Data set from 9th Nov 2020
Release 2.0.1
[ 27th Sep 2020]
- More samples per patient can be exported to cBioPortal
- Searching according to PdxModelID - more ModelIDs / cancer types enabled
- IRCC-GC - gistic values export to cBioPortal - fixed
- Dosing study data are not visible in DataPortal model details - fixed
Release 2.0
[ 6th Aug 2020 ]
- Merge of PDXFinder 6.0
- New dataset from June 2020 available (995 PDX models, 8 research centres, 7 cancer diagnoses)
- New filter “Transnational Access - TEST only”
- Searching according to PdxModelID enabled
Release 1.1:
[ March 2020 ]
- IRCC-GC molecular data are available
- DataHub DB model revised / reworked - molecular data (CNAs, Mutations) are now loaded from N4J DB
- Filter for already biobanked models implemented (see filter Access Modalities / Biobanked for Transnational access)
- In section Search / Export - correction of statistics for molecular data per study