Link Search Menu Expand Document

“Static” cBioPortal

EuroPDX cBioPortal is hosted at https://cbioportal.europdx.eu. It is available to any user without any authentication.

Implementation

EuroPDX cBioPortal is implemented as a cBioOnDemand instance.

Source files are available at https://gitlab.ics.muni.cz/europdx/k8s/cbio-on-demand/staticcbio. Deploy steps are described in the README.md file.

Static TMPlist has to be available in Datahub before deploying the cBioPortal.

Deployment steps

https://gitlab.ics.muni.cz/europdx/k8s/cbio-on-demand/staticcbio/-/blob/master/README.md

SSL certificate for static cBioPortal

For ${CERT_FILE} file with full certification chain should be used.

kubectl create secret tls cbio-static -n cbio-on-demand --key ${KEY_FILE} --cert ${CERT_FILE}